PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00154g00019.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family G2-like
Protein Properties Length: 264aa    MW: 28818.2 Da    PI: 6.6834
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00154g00019.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like96.51.9e-301666151
                   G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51
                              k+rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQ
  Peaxi162Scf00154g00019.1 16 KQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQ 66
                              79************************************************* PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.251373IPR017930Myb domain
Gene3DG3DSA:1.10.10.604.0E-281566IPR009057Homeodomain-like
SuperFamilySSF466897.17E-151566IPR009057Homeodomain-like
TIGRFAMsTIGR015571.9E-221666IPR006447Myb domain, plants
PfamPF002495.7E-81866IPR001005SANT/Myb domain
PfamPF143794.0E-2366111IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    Send to blast
MDPINGGNNN PSLASKQRLR WTHELHERFV DAVAQLGGPD RATPKGVLRV MGVQGLTIYH  60
VKSHLQINEA LKLQMEVQKR LHEQLEVQRQ LQLRIEAQGK YLKKIIEEQQ RLSGVLSEVP  120
GSGVTPLLAG DNGLESDNRT DPGTPAPTSE SPHVDKPAQE HASSKSLSID QSFSSQHEPL  180
TPDSGCNETF PIDSPKGERS SKKQRVGTSA AFSEADMLLP HQILESSLSS AYQQPNPVFL  240
ARDQFNHSSA LSLGSEVPKV SGSN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001275151.11e-156myb family transcription factor APL-like
RefseqXP_006350320.11e-156PREDICTED: myb family transcription factor APL-like isoform X1
TrEMBLQ3LHL31e-156Q3LHL3_SOLTU; MYB-CC type transfactor
STRINGPGSC0003DMT4000226611e-155(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA27962451
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.11e-82G2-like family protein